| Identifier | Protein names | Gene names | Cross reference refseq | Length | Species |
| Q9VQZ6 | Probable elongator complex protein 3; EC 2.3.1.48; | Elp3; | NP_608834.1; | 552 | fruit fly |
| Q9VWE6 | Protein ELYS homolog; | NULL | NP_001285454.1;NP_608340.2; | 2111 | fruit fly |
| Q9VUI3 | Echinoderm microtubule-associated protein-like CG42247; | DCX-EMAP; | NP_648728.2;NP_648729.1; | 1076 | fruit fly |
| Q9W1Y1 | ER membrane protein complex subunit 8/9 homolog; | NULL | NP_611731.1; | 203 | fruit fly |
| P18491 | Protein extra-macrochaetae; | emc; | NP_523876.2; | 199 | fruit fly |
| Q7JX57 | Protein EMRE homolog, mitochondrial; | NULL | NP_611294.1; | 97 | fruit fly |
| P18488 | Homeotic protein empty spiracles; | ems; E4; | NP_731868.1; | 497 | fruit fly |
| Q8T4F7 | Protein enabled; | ena; enb; | NP_001014536.1;NP_001014537.1;NP_001137709.1;NP_725857.1;NP_725858.1;NP_725859.2; | 980 | fruit fly |
| Q8MSX1 | Protein encore; | enc; | NP_001097496.1;NP_524765.2;NP_995992.1; | 1818 | fruit fly |
| Q9VZ49 | Poly(U)-specific endoribonuclease homolog; EC 3.1.-.-; Protein endoU; Uridylate-specific endoribonuclease homolog; | NULL | NP_001285102.1;NP_572668.1; | 592 | fruit fly |
| Q9VN95 | Enolase-phosphatase E1; EC 3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; | NULL | NP_649523.1; | 256 | fruit fly |
| P15007 | Enolase; EC 4.2.1.11; 2-phospho-D-glycerate hydro-lyase; 2-phosphoglycerate dehydratase; | Eno; | NP_001162853.1;NP_477421.1;NP_722721.1;NP_722722.1;NP_722723.1;NP_722724.1; | 500 | fruit fly |
| P04283 | Retrovirus-related Env polyprotein from copia-like transposable element 17.6; | env; | NULL | 456 | fruit fly |
| P10403 | Retrovirus-related Env polyprotein from transposon gypsy; | env; | NULL | 509 | fruit fly |
| P20829 | Retrovirus-related Env polyprotein from transposon 297; | env; | NULL | 471 | fruit fly |
| Q9VI60 | Enhancer of yellow 2b transcription factor; Testis-specific e(y)2 paralog; | e(y)2b; | NP_001287204.1;NP_652310.1; | 95 | fruit fly |
| Q9VYX1 | Enhancer of yellow 2 transcription factor; | e(y)2; ENY2; | NP_524846.1; | 101 | fruit fly |
| Q9VQB7 | EGF domain-specific O-linked N-acetylglucosamine transferase; EC 2.4.1.255; Extracellular O-linked N-acetylglucosamine transferase; | Eogt; | NP_001259934.1;NP_608678.1; | 520 | fruit fly |
| Q9VE34 | Ectopic P granules protein 5 homolog; | NULL | NP_650752.2; | 2455 | fruit fly |
| Q02870 | DNA excision repair protein haywire; EC 3.6.4.12; ATP-dependent DNA helicase hay; ERCC-3 homolog protein; ERCC3Dm; | hay; ERCC3; | NP_001137931.1;NP_524020.2; | 798 | fruit fly |
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