| Identifier | Protein names | Gene names | Cross reference refseq | Length | Species |
| P22465 | Annexin B10; Annexin X; Annexin-10; | AnxB10; AnnX; | NP_001162804.1;NP_476615.1; | 321 | fruit fly |
| Q9VXG4 | Annexin B11; | AnxB11; | NP_001259614.1;NP_001259615.1;NP_001259616.1;NP_001259617.1;NP_001259618.1;NP_523370.1;NP_727978.1; | 511 | fruit fly |
| P22464 | Annexin B9; Annexin IX; Annexin-9; | AnxB9; AnnIX; | NP_001262796.1;NP_001262797.1;NP_476603.1;NP_476604.1;NP_996252.1;NP_996253.1; | 324 | fruit fly |
| P91926 | AP-2 complex subunit alpha; Alpha-adaptin; | AP-2alpha; | NP_476819.2;NP_995607.1; | 940 | fruit fly |
| P54362 | AP-3 complex subunit delta; Delta adaptin subunit of AP-3; Delta-adaptin; Garnet protein; | g; | NP_524785.2; | 1034 | fruit fly |
| Q9V831 | Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10; | APC10; | NP_611223.4; | 195 | fruit fly |
| Q9VTU1 | Autophagy protein 12-like; APG12-like; | Atg12; | NP_648551.3; | 111 | fruit fly |
| Q9VQG2 | Gamma-secretase subunit Aph-1; Presenilin-stabilization factor; | aph-1; PSF; | NP_001259963.1;NP_608710.1; | 238 | fruit fly |
| Q24238 | Alkaline phosphatase 4; EC 3.1.3.1; | Aph-4; | NP_524601.2;NP_733413.1; | 596 | fruit fly |
| Q9V431 | Apoptosis inhibitor 5 homolog; API-5; Antiapoptosis clone 11 protein homolog; AAC-11; | Aac11; LD09852; | NP_477454.1; | 536 | fruit fly |
| A1Z9X0 | Atypical protein kinase C; EC 2.7.11.13; | aPKC; | NP_001036541.1;NP_001036542.1;NP_001036543.1;NP_001036544.1;NP_001036545.1;NP_524892.2; | 606 | fruit fly |
| A8JR14 | Aprataxin and PNK-like factor; EC 4.2.99.18; Apurinic-apyrimidinic endonuclease APLF; | NULL | NP_001097801.1;NP_650455.1; | 255 | fruit fly |
| Q9V496 | Apolipophorins; Retinoid- and fatty acid-binding glycoprotein; [Cleaved into: Apolipophorin-2 (ApoL2) (Apolipophorin II); Apolipophorin-1 (ApoL1) (Apolipophorin I)]; | Rfabg; RfaBp; | NP_001259085.1;NP_001284720.1;NP_001284721.1;NP_524634.2; | 3351 | fruit fly |
| Q9W549 | APOPT family protein CG14806, mitochondrial; | NULL | NP_001259147.1;NP_569956.1; | 176 | fruit fly |
| P29673 | Protein apterous; | ap; | NP_001163058.1;NP_001163059.1;NP_523621.2;NP_724428.1; | 469 | fruit fly |
| Q8MSG8 | Aprataxin-like protein; EC 3.-.-.-; | NULL | NP_001247195.1;NP_650805.1;NP_732421.1;NP_732422.1; | 662 | fruit fly |
| P12426 | Adenine phosphoribosyltransferase; APRT; EC 2.4.2.7; | Aprt; | NP_001286908.1;NP_001286909.1;NP_476637.1; | 182 | fruit fly |
| Q9V5Z7 | Aquaporin; | Drip; | NP_523697.1;NP_725051.2; | 245 | fruit fly |
| Q9VES1 | ARL-6-interacting protein 1 homolog; | NULL | NP_001262647.1;NP_650570.1; | 197 | fruit fly |
| Q24248 | Homeobox protein araucan; | ara; | NP_524045.2; | 717 | fruit fly |
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