| Identifier | Protein names | Gene names | Cross reference refseq | Length | Species |
| D3ZAF9 | Protein Sh3pxd2b; Fragment; | Sh3pxd2b; RGD1309926; | NULL | 804 | rat |
| D3ZLH3 | Uncharacterized protein; | RGD1562601; | NULL | 160 | rat |
| D3ZYA0 | Developmental pluripotency-associated protein 4; | Dppa4; | NULL | 240 | rat |
| D3ZUX6 | Protein Ms4a18; | Ms4a18; LOC100359485; | NULL | 331 | rat |
| D4A000 | Uncharacterized protein; Fragment; | NULL | NULL | 219 | rat |
| D4AD19 | Protein Odf3b; | Odf3b; | NP_001178921.1; | 237 | rat |
| D4A7S7 | Protein Nfe2l3; | Nfe2l3; | XP_231763.6; | 647 | rat |
| D3ZLE6 | Protein LOC100364956; | LOC683761; LOC100364956; | NULL | 365 | rat |
| D3ZSF4 | Protein Col13a1; | Col13a1; | NULL | 739 | rat |
| D3ZVF5 | Protein Rpl31l3; | Rpl31l3; Rpl31-ps20 Rpl31l20; | NULL | 125 | rat |
| D3ZXQ6 | LETM1 domain-containing protein LETM2, mitochondrial; | Letm2; | NULL | 411 | rat |
| D4A4D6 | Uncharacterized protein; | NULL | NULL | 163 | rat |
| E9PTA9 | Protein tGap1; | tGap1; | NULL | 808 | rat |
| D3ZL82 | Protein Trim37; Fragment; | Trim37; | NULL | 1007 | rat |
| E9PTJ3 | Protein Eya2; | Eya2; | NULL | 531 | rat |
| F1M023 | Uncharacterized protein; Fragment; | LOC685411; | NULL | 255 | rat |
| F1LPE9 | ELKS/Rab6-interacting/CAST family member 1; | Erc1; | NULL | 948 | rat |
| F1LM57 | DNA-directed RNA polymerase; EC 2.7.7.6; | Polr1b; | NULL | 1134 | rat |
| F1LSP4 | Protein LOC100912019; | LOC100912019; | NULL | 1512 | rat |
| F1M2G6 | Protein Apbb2; Fragment; | Apbb2; | NULL | 600 | rat |
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